This is a resubmission (v0.2.7) addressing reviewer comments on package quality, documentation, and replication material. Changes include:
ID/ID.1 after raster::intersect()) and newer sf >= 1.0 (which
produces ID_1/ID_2). Affected simulate_misaligned_data() and
the case example vignette (#issue number if you have one).\examples{} blocks to all exported functions; slow MCMC-based functions
use \dontrun{} while lightweight functions (e.g., simulate_misaligned_data(),
get_abrm_model(), gen_correlated_spat(), and all S3 methods for
misaligned_data) now have fully executable examplesvcov.abrm example from \dontrun{} to \donttest{} per CRAN policy for examples that are valid but too slow for routine checkingrun_abrm() silently writing a PDF to the user's working directory:
changed default of save_plots from TRUE to FALSE; diagnostic plots are
now obtained explicitly via plot() on the returned objectplot.misaligned_data() S3 method for spatial data explorationcoef.abrm(), confint.abrm(), fitted.abrm(), waic.abrm(), print.waic_abrm() S3 methods to improve model result inspection without accessing internal object structure directlyeval = TRUE for all simulated-data (Example 1)
code chunks so the vignette executes and displays output during buildlibrary(nimble) call from vignette (nimble is already
loaded as a dependency of spatialAtomizeR)0 errors ✔ | 0 warnings ✔ | 0 notes ✔
There are currently no downstream dependencies for this package.
print() statement causing debug output in console@keywords internal (no longer exported)